WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39B6A.43a Sequence Name  Y39B6A.43a
Length (nt)  2175   Chromosome Location  V: 18961101-18961416
Chromosome . Primary Identifier  V Chromosome Location . Start  18961101
Chromosome Location . End  18961416
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.43a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42340 Y39B6A.43, isoform a 82.5 724 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00056203
WBRNAi00056204
WBRNAi00056205
WBRNAi00036908

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39B6A.43a 18961101 18961416 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012701 Y39B6A.43 Y39B6A.43 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39B6A.43a 18961101 18961416 -1
CDS:Y39B6A.43a 18961551 18961748 -1
CDS:Y39B6A.43a 18963637 18963942 -1
CDS:Y39B6A.43a 18964000 18964136 -1
CDS:Y39B6A.43a 18964297 18964440 -1
CDS:Y39B6A.43a 18964911 18965095 -1
CDS:Y39B6A.43a 18965480 18965629 -1
CDS:Y39B6A.43a 18966282 18966446 -1
CDS:Y39B6A.43a 18966505 18966853 -1
CDS:Y39B6A.43a 18967507 18967619 -1
CDS:Y39B6A.43a 18967676 18967787 -1

1 Sequence

Length
2175

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39B6A.43a.1 Y39B6A.43a.1 2348   V: 18960964-18967823