WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014882 Gene Name  Y39B6A.t8
Sequence Name  ? Y39B6A.t8 Organism  Caenorhabditis elegans
Biotype  SO:0000336 Genetic Position 
Length (nt)  ? 72
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014882

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

11 Allele

Public Name
gk963271
gk962705
gk963489
gk963304
gk963809
gk963637
gk320155
WBVar02123149
WBVar01597485
WBVar01597484
WBVar01597483

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00014882 19084605 19084676 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_19084677..19087722   3046 V: 19084677-19087722 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00014882 19084605 19084676 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
72

1 Sequence Ontology Term