WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.1a.3 Sequence Name  Y43F8B.1a.3
Length (nt)  2431   Chromosome Location  V: 19534880-19546189
Chromosome . Primary Identifier  V Chromosome Location . Start  19534880
Chromosome Location . End  19546189 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.1a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012812 Y43F8B.1 Y43F8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.1a Y43F8B.1a 930   V: 19535847-19535903

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1a.3 19534880 19546189 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218062   276   V: 19534880-19535155 Caenorhabditis elegans
Exon218070   136   V: 19535768-19535903 Caenorhabditis elegans
Exon218079   47   V: 19535956-19536002 Caenorhabditis elegans
Exon218088   141   V: 19537043-19537183 Caenorhabditis elegans
Exon218097   100   V: 19537435-19537534 Caenorhabditis elegans
Exon218106   52   V: 19537582-19537633 Caenorhabditis elegans
Exon218115   215   V: 19538970-19539184 Caenorhabditis elegans
Exon218124   102   V: 19539241-19539342 Caenorhabditis elegans
Exon218135   123   V: 19543260-19543382 Caenorhabditis elegans
Exon218143   132   V: 19543944-19544075 Caenorhabditis elegans
Exon218150   911   V: 19544534-19545444 Caenorhabditis elegans
Exon218156   112   V: 19545493-19545604 Caenorhabditis elegans
Exon218162   50   V: 19545654-19545703 Caenorhabditis elegans
Exon218168   34   V: 19546156-19546189 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1a.3 19534880 19546189 -1

1 Sequence

Length
2431

1 Sequence Ontology Term

Identifier Name Description
transcript