WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y43F8B.1a Sequence Name  Y43F8B.1a
Length (nt)  930   Chromosome Location  V: 19535847-19535903
Chromosome . Primary Identifier  V Chromosome Location . Start  19535847
Chromosome Location . End  19535903
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32015 Y43F8B.1, isoform a 35.4 309 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056508
WBRNAi00019960
WBRNAi00019962
WBRNAi00020549
WBRNAi00037052

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y43F8B.1a 19535847 19535903 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012812 Y43F8B.1 Y43F8B.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y43F8B.1a 19535847 19535903 -1
CDS:Y43F8B.1a 19535956 19536002 -1
CDS:Y43F8B.1a 19537043 19537183 -1
CDS:Y43F8B.1a 19537435 19537534 -1
CDS:Y43F8B.1a 19537582 19537633 -1
CDS:Y43F8B.1a 19538970 19539184 -1
CDS:Y43F8B.1a 19539241 19539342 -1
CDS:Y43F8B.1a 19543260 19543382 -1
CDS:Y43F8B.1a 19543944 19544036 -1

1 Sequence

Length
930

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y43F8B.1a.3 Y43F8B.1a.3 2431   V: 19534880-19546189
Transcript:Y43F8B.1a.1 Y43F8B.1a.1 1306   V: 19534898-19544075
Transcript:Y43F8B.1a.2 Y43F8B.1a.2 3006   V: 19534924-19546196