WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.1a.1 Sequence Name  Y43F8B.1a.1
Length (nt)  1306   Chromosome Location  V: 19534898-19544075
Chromosome . Primary Identifier  V Chromosome Location . Start  19534898
Chromosome Location . End  19544075 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012812 Y43F8B.1 Y43F8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.1a Y43F8B.1a 930   V: 19535847-19535903

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1a.1 19534898 19544075 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218065   258   V: 19534898-19535155 Caenorhabditis elegans
Exon218069   136   V: 19535768-19535903 Caenorhabditis elegans
Exon218077   47   V: 19535956-19536002 Caenorhabditis elegans
Exon218086   141   V: 19537043-19537183 Caenorhabditis elegans
Exon218095   100   V: 19537435-19537534 Caenorhabditis elegans
Exon218104   52   V: 19537582-19537633 Caenorhabditis elegans
Exon218113   215   V: 19538970-19539184 Caenorhabditis elegans
Exon218122   102   V: 19539241-19539342 Caenorhabditis elegans
Exon218133   123   V: 19543260-19543382 Caenorhabditis elegans
Exon218141   132   V: 19543944-19544075 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1a.1 19534898 19544075 -1

1 Sequence

Length
1306

1 Sequence Ontology Term

Identifier Name Description
transcript