WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8B.1a.2 Sequence Name  Y43F8B.1a.2
Length (nt)  3006   Chromosome Location  V: 19534924-19546196
Chromosome . Primary Identifier  V Chromosome Location . Start  19534924
Chromosome Location . End  19546196 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8B.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012812 Y43F8B.1 Y43F8B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8B.1a Y43F8B.1a 930   V: 19535847-19535903

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1a.2 19534924 19546196 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218066   980   V: 19534924-19535903 Caenorhabditis elegans
Exon218078   47   V: 19535956-19536002 Caenorhabditis elegans
Exon218087   141   V: 19537043-19537183 Caenorhabditis elegans
Exon218096   100   V: 19537435-19537534 Caenorhabditis elegans
Exon218105   52   V: 19537582-19537633 Caenorhabditis elegans
Exon218114   215   V: 19538970-19539184 Caenorhabditis elegans
Exon218123   102   V: 19539241-19539342 Caenorhabditis elegans
Exon218134   123   V: 19543260-19543382 Caenorhabditis elegans
Exon218142   132   V: 19543944-19544075 Caenorhabditis elegans
Exon218149   911   V: 19544534-19545444 Caenorhabditis elegans
Exon218155   112   V: 19545493-19545604 Caenorhabditis elegans
Exon218161   50   V: 19545654-19545703 Caenorhabditis elegans
Exon218170   41   V: 19546156-19546196 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8B.1a.2 19534924 19546196 -1

1 Sequence

Length
3006

1 Sequence Ontology Term

Identifier Name Description
transcript