WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8C.8.1 Sequence Name  Y43F8C.8.1
Length (nt)  642   Chromosome Location  V: 19644239-19645676
Chromosome . Primary Identifier  V Chromosome Location . Start  19644239
Chromosome Location . End  19645676 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8C.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012830 mrps-28 Y43F8C.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8C.8 Y43F8C.8 519   V: 19644239-19644370

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.8.1 19644239 19645676 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218324   132   V: 19644239-19644370 Caenorhabditis elegans
Exon218325   167   V: 19644421-19644587 Caenorhabditis elegans
Exon218326   343   V: 19645334-19645676 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.8.1 19644239 19645676 1

1 Sequence

Length
642

1 Sequence Ontology Term

Identifier Name Description
transcript