WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F8C.19.1 Sequence Name  Y43F8C.19.1
Length (nt)  936   Chromosome Location  V: 19706285-19708949
Chromosome . Primary Identifier  V Chromosome Location . Start  19706285
Chromosome Location . End  19708949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8C.19.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005714 srv-3 Y43F8C.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8C.19 Y43F8C.19 936   V: 19706285-19706339

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.19.1 19706285 19708949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218432   55   V: 19706285-19706339 Caenorhabditis elegans
Exon218433   355   V: 19706894-19707248 Caenorhabditis elegans
Exon218434   367   V: 19708057-19708423 Caenorhabditis elegans
Exon218435   159   V: 19708791-19708949 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F8C.19.1 19706285 19708949 -1

1 Sequence

Length
936

1 Sequence Ontology Term

Identifier Name Description
transcript