WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M162.3a.1 Sequence Name  M162.3a.1
Length (nt)  978   Chromosome Location  V: 19784129-19785942
Chromosome . Primary Identifier  V Chromosome Location . Start  19784129
Chromosome Location . End  19785942 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M162.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010929 srt-45 M162.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M162.3a M162.3a 978   V: 19784129-19784474

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M162.3a.1 19784129 19785942 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon218517   346   V: 19784129-19784474 Caenorhabditis elegans
Exon218519   245   V: 19784809-19785053 Caenorhabditis elegans
Exon218522   126   V: 19785172-19785297 Caenorhabditis elegans
Exon218523   216   V: 19785635-19785850 Caenorhabditis elegans
Exon218525   45   V: 19785898-19785942 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M162.3a.1 19784129 19785942 1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
transcript