WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M162.3a Sequence Name  M162.3a
Length (nt)  978   Chromosome Location  V: 19784129-19784474
Chromosome . Primary Identifier  V Chromosome Location . Start  19784129
Chromosome Location . End  19784474
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M162.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51494 SRT-45, isoform a 36.9 325 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00050980
WBRNAi00017221

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M162.3a 19784129 19784474 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010929 srt-45 M162.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:M162.3a 19784129 19784474 1
CDS:M162.3a 19784809 19785053 1
CDS:M162.3a 19785172 19785297 1
CDS:M162.3a 19785635 19785850 1
CDS:M162.3a 19785898 19785942 1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M162.3a.1 M162.3a.1 978   V: 19784129-19785942