WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y60A3A.12 Sequence Name  Y60A3A.12
Length (nt)  1431   Chromosome Location  V: 19909137-19909148
Chromosome . Primary Identifier  V Chromosome Location . Start  19909137
Chromosome Location . End  19909148
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y60A3A.12

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27297 CHK-2 53.3 476 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00052868
WBRNAi00052869
WBRNAi00018444
WBRNAi00077682
WBRNAi00037650
WBRNAi00087555
WBRNAi00073398
WBRNAi00004972
WBRNAi00087560
WBRNAi00004974
WBRNAi00004975

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y60A3A.12 19909137 19909148 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000499 chk-2 Y60A3A.12 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y60A3A.12 19909137 19909148 -1
CDS:Y60A3A.12 19909844 19910002 -1
CDS:Y60A3A.12 19910588 19910667 -1
CDS:Y60A3A.12 19910909 19911006 -1
CDS:Y60A3A.12 19913755 19913879 -1
CDS:Y60A3A.12 19913957 19914043 -1
CDS:Y60A3A.12 19914093 19914149 -1
CDS:Y60A3A.12 19914203 19914322 -1
CDS:Y60A3A.12 19914674 19914781 -1
CDS:Y60A3A.12 19915131 19915267 -1
CDS:Y60A3A.12 19915374 19915512 -1
CDS:Y60A3A.12 19915556 19915686 -1
CDS:Y60A3A.12 19915743 19915879 -1
CDS:Y60A3A.12 19915933 19915973 -1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y60A3A.12.1 Y60A3A.12.1 2532   V: 19908086-19916023