WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y113G7A.8b Sequence Name  Y113G7A.8b
Length (nt)  1767   Chromosome Location  V: 20076025-20076161
Chromosome . Primary Identifier  V Chromosome Location . Start  20076025
Chromosome Location . End  20076161
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7A.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48258 FRE-1, isoform b 66.7 588 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00055389
WBRNAi00036580

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y113G7A.8b 20076025 20076161 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001485 fre-1 Y113G7A.8 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y113G7A.8b 20076025 20076161 -1
CDS:Y113G7A.8b 20079852 20080048 -1
CDS:Y113G7A.8b 20080198 20080319 -1
CDS:Y113G7A.8b 20080503 20080678 -1
CDS:Y113G7A.8b 20082073 20082318 -1
CDS:Y113G7A.8b 20083097 20083260 -1
CDS:Y113G7A.8b 20083324 20083456 -1
CDS:Y113G7A.8b 20085272 20085605 -1
CDS:Y113G7A.8b 20085766 20085894 -1
CDS:Y113G7A.8b 20087595 20087723 -1

1 Sequence

Length
1767

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y113G7A.8b.1 Y113G7A.8b.1 1886   V: 20075918-20087735