WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y113G7A.4a Sequence Name  Y113G7A.4a
Length (nt)  2643   Chromosome Location  V: 20105794-20106016
Chromosome . Primary Identifier  V Chromosome Location . Start  20105794
Chromosome Location . End  20106016
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7A.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23275 NCX-1, isoform a 97.2 880 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00055385
WBRNAi00030264

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y113G7A.4a 20105794 20106016 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003566 ncx-1 Y113G7A.4 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y113G7A.4a 20105794 20106016 -1
CDS:Y113G7A.4a 20108305 20108461 -1
CDS:Y113G7A.4a 20109280 20109426 -1
CDS:Y113G7A.4a 20110428 20110710 -1
CDS:Y113G7A.4a 20111396 20111501 -1
CDS:Y113G7A.4a 20112220 20112585 -1
CDS:Y113G7A.4a 20113771 20113851 -1
CDS:Y113G7A.4a 20113970 20114122 -1
CDS:Y113G7A.4a 20115837 20116062 -1
CDS:Y113G7A.4a 20117107 20117234 -1
CDS:Y113G7A.4a 20118031 20118251 -1
CDS:Y113G7A.4a 20118648 20118860 -1
CDS:Y113G7A.4a 20119654 20119806 -1
CDS:Y113G7A.4a 20120243 20120344 -1
CDS:Y113G7A.4a 20120573 20120656 -1

1 Sequence

Length
2643

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y113G7A.4a.1 Y113G7A.4a.1 2821   V: 20105633-20120673