WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y113G7B.23a Sequence Name  Y113G7B.23a
Length (nt)  2370   Chromosome Location  V: 20239859-20240007
Chromosome . Primary Identifier  V Chromosome Location . Start  20239859
Chromosome Location . End  20240007
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7B.23a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25208 SWSN-1, isoform a 85.4 789 Caenorhabditis elegans
 

Other

42 RNAi

WormBase ID
WBRNAi00091449
WBRNAi00055403
WBRNAi00036590
WBRNAi00072715
WBRNAi00072716
WBRNAi00074939
WBRNAi00074940
WBRNAi00061260
WBRNAi00074935
WBRNAi00074937
WBRNAi00074936
WBRNAi00074938
WBRNAi00074941
WBRNAi00072714
WBRNAi00074942
WBRNAi00107550
WBRNAi00061261
WBRNAi00069099
WBRNAi00091446
WBRNAi00093910
WBRNAi00079553
WBRNAi00079691
WBRNAi00079737
WBRNAi00079829
WBRNAi00079507
WBRNAi00079599
WBRNAi00079645
WBRNAi00079783
WBRNAi00093914
WBRNAi00093948

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y113G7B.23a 20239859 20240007 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004203 swsn-1 Y113G7B.23 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y113G7B.23a 20239859 20240007 -1
CDS:Y113G7B.23a 20241260 20242225 -1
CDS:Y113G7B.23a 20244238 20244658 -1
CDS:Y113G7B.23a 20246040 20246132 -1
CDS:Y113G7B.23a 20247124 20247749 -1
CDS:Y113G7B.23a 20249346 20249460 -1

1 Sequence

Length
2370

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y113G7B.23a.1 Y113G7B.23a.1 3069   V: 20239182-20249482