WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38H6C.20 Sequence Name  Y38H6C.20
Length (nt)  2211   Chromosome Location  V: 20547293-20547439
Chromosome . Primary Identifier  V Chromosome Location . Start  20547293
Chromosome Location . End  20547439
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38H6C.20

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38642 Y38H6C.20 82.9 736 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00067998
WBRNAi00056072
WBRNAi00020323
WBRNAi00036869

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38H6C.20 20547293 20547439 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012632 Y38H6C.20 Y38H6C.20 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38H6C.20 20547293 20547439 -1
CDS:Y38H6C.20 20547504 20547630 -1
CDS:Y38H6C.20 20548070 20548285 -1
CDS:Y38H6C.20 20548417 20548661 -1
CDS:Y38H6C.20 20548763 20548963 -1
CDS:Y38H6C.20 20549047 20549111 -1
CDS:Y38H6C.20 20549161 20549246 -1
CDS:Y38H6C.20 20549294 20549462 -1
CDS:Y38H6C.20 20549708 20549849 -1
CDS:Y38H6C.20 20549894 20550003 -1
CDS:Y38H6C.20 20550054 20550206 -1
CDS:Y38H6C.20 20550254 20550374 -1
CDS:Y38H6C.20 20550516 20550698 -1
CDS:Y38H6C.20 20550919 20551164 -1

1 Sequence

Length
2211

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38H6C.20.1 Y38H6C.20.1 2301   V: 20547235-20551196