WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44A6B.1.1 Sequence Name  Y44A6B.1.1
Length (nt)  960   Chromosome Location  V: 20639594-20641049
Chromosome . Primary Identifier  V Chromosome Location . Start  20639594
Chromosome Location . End  20641049 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44A6B.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012846 srxa-14 Y44A6B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44A6B.1 Y44A6B.1 960   V: 20639594-20639690

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y44A6B.1.1 20639594 20641049 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220035   97   V: 20639594-20639690 Caenorhabditis elegans
Exon220036   287   V: 20639733-20640019 Caenorhabditis elegans
Exon220037   105   V: 20640064-20640168 Caenorhabditis elegans
Exon220038   127   V: 20640281-20640407 Caenorhabditis elegans
Exon220039   158   V: 20640659-20640816 Caenorhabditis elegans
Exon220040   186   V: 20640864-20641049 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y44A6B.1.1 20639594 20641049 1

1 Sequence

Length
960

1 Sequence Ontology Term

Identifier Name Description
transcript