WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y44A6B.2a Sequence Name  Y44A6B.2a
Length (nt)  975   Chromosome Location  V: 20642289-20642385
Chromosome . Primary Identifier  V Chromosome Location . Start  20642289
Chromosome Location . End  20642385
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44A6B.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38238 SRXA-15, isoform a 37.1 324 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00056542
WBRNAi00020575
WBRNAi00023353
WBRNAi00023866
WBRNAi00024153
WBRNAi00024226

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y44A6B.2a 20642289 20642385 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012847 srxa-15 Y44A6B.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y44A6B.2a 20642289 20642385 1
CDS:Y44A6B.2a 20642887 20643000 1
CDS:Y44A6B.2a 20643047 20643216 1
CDS:Y44A6B.2a 20643270 20643377 1
CDS:Y44A6B.2a 20643426 20643549 1
CDS:Y44A6B.2a 20643950 20644113 1
CDS:Y44A6B.2a 20644159 20644356 1

1 Sequence

Length
975

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y44A6B.2a.1 Y44A6B.2a.1 1092   V: 20642196-20644380