WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53F8.1.2 Sequence Name  F53F8.1.2
Length (nt)  967   Chromosome Location  V: 20686906-20688835
Chromosome . Primary Identifier  V Chromosome Location . Start  20686906
Chromosome Location . End  20688835 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F8.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009998 klf-2 F53F8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53F8.1 F53F8.1 900   V: 20686908-20687096

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53F8.1.2 20686906 20688835 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220213   191   V: 20686906-20687096 Caenorhabditis elegans
Exon220216   421   V: 20687145-20687565 Caenorhabditis elegans
Exon220218   60   V: 20687611-20687670 Caenorhabditis elegans
Exon220220   295   V: 20688541-20688835 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53F8.1.2 20686906 20688835 1

1 Sequence

Length
967

1 Sequence Ontology Term

Identifier Name Description
transcript