WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53F8.1 Sequence Name  F53F8.1
Length (nt)  900   Chromosome Location  V: 20686908-20687096
Chromosome . Primary Identifier  V Chromosome Location . Start  20686908
Chromosome Location . End  20687096
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F8.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44073 KLF-2 34.8 299 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00048160
WBRNAi00078332
WBRNAi00015532
WBRNAi00076465

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53F8.1 20686908 20687096 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009998 klf-2 F53F8.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53F8.1 20686908 20687096 1
CDS:F53F8.1 20687145 20687565 1
CDS:F53F8.1 20687611 20687670 1
CDS:F53F8.1 20688541 20688770 1

1 Sequence

Length
900

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53F8.1.1 F53F8.1.1 1063   V: 20685683-20688830
Transcript:F53F8.1.2 F53F8.1.2 967   V: 20686906-20688835