WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44A6D.4.1 Sequence Name  Y44A6D.4.1
Length (nt)  1333   Chromosome Location  V: 20798218-20801207
Chromosome . Primary Identifier  V Chromosome Location . Start  20798218
Chromosome Location . End  20801207 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44A6D.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004748 sdf-9 Y44A6D.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44A6D.4 Y44A6D.4 1038   V: 20798272-20798307

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y44A6D.4.1 20798218 20801207 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220567   90   V: 20798218-20798307 Caenorhabditis elegans
Exon220568   91   V: 20798353-20798443 Caenorhabditis elegans
Exon220569   342   V: 20798934-20799275 Caenorhabditis elegans
Exon220570   96   V: 20799762-20799857 Caenorhabditis elegans
Exon220571   458   V: 20799902-20800359 Caenorhabditis elegans
Exon220572   256   V: 20800952-20801207 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y44A6D.4.1 20798218 20801207 1

1 Sequence

Length
1333

1 Sequence Ontology Term

Identifier Name Description
transcript