WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T03D8.5b Sequence Name  T03D8.5b
Length (nt)  3165   Chromosome Location  V: 20820405-20820482
Chromosome . Primary Identifier  V Chromosome Location . Start  20820405
Chromosome Location . End  20820482
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D8.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47774 GCY-22, isoform b 118.3 1054 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052266
WBRNAi00018070
WBRNAi00035085
WBRNAi00095453

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T03D8.5b 20820405 20820482 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001547 gcy-22 T03D8.5 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:T03D8.5b 20820405 20820482 -1
CDS:T03D8.5b 20820527 20820621 -1
CDS:T03D8.5b 20820675 20820948 -1
CDS:T03D8.5b 20821168 20821360 -1
CDS:T03D8.5b 20821406 20821479 -1
CDS:T03D8.5b 20821527 20821982 -1
CDS:T03D8.5b 20822040 20822300 -1
CDS:T03D8.5b 20822346 20822607 -1
CDS:T03D8.5b 20822655 20822854 -1
CDS:T03D8.5b 20822972 20823117 -1
CDS:T03D8.5b 20823166 20823306 -1
CDS:T03D8.5b 20823352 20823522 -1
CDS:T03D8.5b 20823567 20823689 -1
CDS:T03D8.5b 20823733 20823965 -1
CDS:T03D8.5b 20824017 20824149 -1
CDS:T03D8.5b 20824194 20824300 -1
CDS:T03D8.5b 20824811 20825028 -1

1 Sequence

Length
3165

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T03D8.5b.1 T03D8.5b.1 3422   V: 20820148-20825028