WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25C8.3e Sequence Name  F25C8.3e
Length (nt)  9483   Chromosome Location  V: 20879854-20879948
Chromosome . Primary Identifier  V Chromosome Location . Start  20879854
Chromosome Location . End  20879948
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25C8.3e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47428 UNC-80, isoform e 355.8 3160 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00089754
WBRNAi00001256
WBRNAi00045483
WBRNAi00027300
WBRNAi00013858
WBRNAi00025214
WBRNAi00025215
WBRNAi00069166
WBRNAi00090324
WBRNAi00090006
WBRNAi00090165
WBRNAi00115847

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25C8.3e 20879854 20879948 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006812 unc-80 F25C8.3 Caenorhabditis elegans

33 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25C8.3e 20879854 20879948 1
CDS:F25C8.3e 20880662 20880736 1
CDS:F25C8.3e 20880779 20880827 1
CDS:F25C8.3e 20881241 20881360 1
CDS:F25C8.3e 20881406 20881537 1
CDS:F25C8.3e 20882809 20883433 1
CDS:F25C8.3e 20884253 20884522 1
CDS:F25C8.3e 20884605 20884763 1
CDS:F25C8.3e 20885191 20885577 1
CDS:F25C8.3e 20885622 20886027 1
CDS:F25C8.3e 20886077 20886300 1
CDS:F25C8.3e 20886346 20886509 1
CDS:F25C8.3e 20886583 20886701 1
CDS:F25C8.3e 20887734 20888152 1
CDS:F25C8.3e 20888781 20888941 1
CDS:F25C8.3e 20888994 20889570 1
CDS:F25C8.3e 20889615 20889716 1
CDS:F25C8.3e 20890252 20890413 1
CDS:F25C8.3e 20890880 20891216 1
CDS:F25C8.3e 20891263 20891338 1
CDS:F25C8.3e 20891718 20892633 1
CDS:F25C8.3e 20893261 20893499 1
CDS:F25C8.3e 20894014 20894100 1
CDS:F25C8.3e 20894147 20894299 1
CDS:F25C8.3e 20894362 20894763 1
CDS:F25C8.3e 20894834 20895589 1
CDS:F25C8.3e 20895674 20895963 1
CDS:F25C8.3e 20896014 20896695 1
CDS:F25C8.3e 20896753 20897020 1
CDS:F25C8.3e 20897076 20897368 1

1 Sequence

Length
9483

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25C8.3e.1 F25C8.3e.1 9654   V: 20879854-20898909