WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:AC8.3.1 Sequence Name  AC8.3.1
Length (nt)  1125   Chromosome Location  X: 228080-229474
Chromosome . Primary Identifier  X Chromosome Location . Start  228080
Chromosome Location . End  229474 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AC8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007075 AC8.3 AC8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:AC8.3 AC8.3 1125   X: 228080-228202

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:AC8.3.1 228080 229474 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221379   123   X: 228080-228202 Caenorhabditis elegans
Exon221380   111   X: 228248-228358 Caenorhabditis elegans
Exon221381   193   X: 228414-228606 Caenorhabditis elegans
Exon221382   280   X: 228648-228927 Caenorhabditis elegans
Exon221383   127   X: 228970-229096 Caenorhabditis elegans
Exon221384   210   X: 229141-229350 Caenorhabditis elegans
Exon221385   81   X: 229394-229474 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:AC8.3.1 228080 229474 -1

1 Sequence

Length
1125

1 Sequence Ontology Term

Identifier Name Description
transcript