WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R57.2.1 Sequence Name  R57.2.1
Length (nt)  775   Chromosome Location  X: 297234-299287
Chromosome . Primary Identifier  X Chromosome Location . Start  297234
Chromosome Location . End  299287 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R57.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020083 R57.2 R57.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R57.2 R57.2 651   X: 297248-297332

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R57.2.1 297234 299287 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221452   99   X: 297234-297332 Caenorhabditis elegans
Exon221453   149   X: 297843-297991 Caenorhabditis elegans
Exon221454   153   X: 298176-298328 Caenorhabditis elegans
Exon221455   129   X: 298441-298569 Caenorhabditis elegans
Exon221456   245   X: 299043-299287 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R57.2.1 297234 299287 1

1 Sequence

Length
775

1 Sequence Ontology Term

Identifier Name Description
transcript