WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R04A9.2 Sequence Name  R04A9.2
Length (nt)  3174   Chromosome Location  X: 372254-372512
Chromosome . Primary Identifier  X Chromosome Location . Start  372254
Chromosome Location . End  372512
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04A9.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04789 NRDE-3 119.7 1057 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00001864
WBRNAi00051213
WBRNAi00034570
WBRNAi00017384
WBRNAi00076593
WBRNAi00061862

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R04A9.2 372254 372512 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019862 nrde-3 R04A9.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:R04A9.2 372254 372512 1
CDS:R04A9.2 372559 372736 1
CDS:R04A9.2 372786 373065 1
CDS:R04A9.2 373414 374024 1
CDS:R04A9.2 374077 374287 1
CDS:R04A9.2 374496 374824 1
CDS:R04A9.2 374872 375065 1
CDS:R04A9.2 375390 375795 1
CDS:R04A9.2 375842 376193 1
CDS:R04A9.2 376250 376440 1
CDS:R04A9.2 376489 376651 1

1 Sequence

Length
3174

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R04A9.2.1 R04A9.2.1 3442   X: 372235-376900