WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52D1.2a Sequence Name  F52D1.2a
Length (nt)  501   Chromosome Location  X: 446356-446445
Chromosome . Primary Identifier  X Chromosome Location . Start  446356
Chromosome Location . End  446445
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52D1.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35717 F52D1.2, isoform a 18.9 166 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047959
WBRNAi00015392
WBRNAi00032603

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52D1.2a 446356 446445 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018683 F52D1.2 F52D1.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52D1.2a 446356 446445 -1
CDS:F52D1.2a 446493 446549 -1
CDS:F52D1.2a 447476 447541 -1
CDS:F52D1.2a 447840 447914 -1
CDS:F52D1.2a 448568 448612 -1
CDS:F52D1.2a 448736 448903 -1

1 Sequence

Length
501

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52D1.2a.2 F52D1.2a.2 672   X: 446217-448935
Transcript:F52D1.2a.1 F52D1.2a.1 714   X: 446252-450021