WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28C10.3.1 Sequence Name  F28C10.3.1
Length (nt)  1576   Chromosome Location  X: 531841-535828
Chromosome . Primary Identifier  X Chromosome Location . Start  531841
Chromosome Location . End  535828 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28C10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017898 F28C10.3 F28C10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28C10.3 F28C10.3 1050   X: 532286-532349

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28C10.3.1 531841 535828 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon221971   509   X: 531841-532349 Caenorhabditis elegans
Exon221972   92   X: 532926-533017 Caenorhabditis elegans
Exon221973   171   X: 533701-533871 Caenorhabditis elegans
Exon221974   149   X: 533916-534064 Caenorhabditis elegans
Exon221975   135   X: 534366-534500 Caenorhabditis elegans
Exon221976   211   X: 534555-534765 Caenorhabditis elegans
Exon221977   102   X: 535314-535415 Caenorhabditis elegans
Exon221978   67   X: 535465-535531 Caenorhabditis elegans
Exon221979   140   X: 535689-535828 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28C10.3.1 531841 535828 -1

1 Sequence

Length
1576

1 Sequence Ontology Term

Identifier Name Description
transcript