WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D7.4.1 Sequence Name  T19D7.4.1
Length (nt)  1817   Chromosome Location  X: 658477-661777
Chromosome . Primary Identifier  X Chromosome Location . Start  658477
Chromosome Location . End  661777 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020572 rund-1 T19D7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D7.4 T19D7.4 1650   X: 658624-658730

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19D7.4.1 658477 661777 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222324   254   X: 658477-658730 Caenorhabditis elegans
Exon222325   68   X: 658778-658845 Caenorhabditis elegans
Exon222326   125   X: 659274-659398 Caenorhabditis elegans
Exon222327   312   X: 659447-659758 Caenorhabditis elegans
Exon222328   124   X: 659824-659947 Caenorhabditis elegans
Exon222329   131   X: 660415-660545 Caenorhabditis elegans
Exon222330   237   X: 660597-660833 Caenorhabditis elegans
Exon222331   228   X: 660877-661104 Caenorhabditis elegans
Exon222332   145   X: 661150-661294 Caenorhabditis elegans
Exon222333   67   X: 661541-661607 Caenorhabditis elegans
Exon222334   126   X: 661652-661777 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19D7.4.1 658477 661777 -1

1 Sequence

Length
1817

1 Sequence Ontology Term

Identifier Name Description
transcript