WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M02A10.3b.1 Sequence Name  M02A10.3b.1
Length (nt)  2219   Chromosome Location  X: 720283-725968
Chromosome . Primary Identifier  X Chromosome Location . Start  720283
Chromosome Location . End  725968 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M02A10.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004829 sli-1 M02A10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M02A10.3b M02A10.3b 1698   X: 720729-720923

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M02A10.3b.1 720283 725968 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222558   641   X: 720283-720923 Caenorhabditis elegans
Exon222561   126   X: 722153-722278 Caenorhabditis elegans
Exon222563   174   X: 722336-722509 Caenorhabditis elegans
Exon222566   220   X: 723164-723383 Caenorhabditis elegans
Exon222569   270   X: 723433-723702 Caenorhabditis elegans
Exon222572   150   X: 724095-724244 Caenorhabditis elegans
Exon222575   293   X: 724298-724590 Caenorhabditis elegans
Exon222578   129   X: 725139-725267 Caenorhabditis elegans
Exon222582   75   X: 725707-725781 Caenorhabditis elegans
Exon222586   141   X: 725828-725968 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M02A10.3b.1 720283 725968 -1

1 Sequence

Length
2219

1 Sequence Ontology Term

Identifier Name Description
transcript