WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04G9.2.1 Sequence Name  T04G9.2.1
Length (nt)  2027   Chromosome Location  X: 777721-780533
Chromosome . Primary Identifier  X Chromosome Location . Start  777721
Chromosome Location . End  780533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04G9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003534 nas-15 T04G9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04G9.2 T04G9.2 1716   X: 777734-777838

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04G9.2.1 777721 780533 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222670   118   X: 777721-777838 Caenorhabditis elegans
Exon222671   165   X: 777910-778074 Caenorhabditis elegans
Exon222672   149   X: 778121-778269 Caenorhabditis elegans
Exon222673   137   X: 778481-778617 Caenorhabditis elegans
Exon222674   369   X: 778666-779034 Caenorhabditis elegans
Exon222675   177   X: 779092-779268 Caenorhabditis elegans
Exon222676   132   X: 779321-779452 Caenorhabditis elegans
Exon222677   118   X: 779510-779627 Caenorhabditis elegans
Exon222678   138   X: 779707-779844 Caenorhabditis elegans
Exon222679   524   X: 780010-780533 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04G9.2.1 777721 780533 1

1 Sequence

Length
2027

1 Sequence Ontology Term

Identifier Name Description
transcript