WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25E2.5a.1 Sequence Name  F25E2.5a.1
Length (nt)  3126   Chromosome Location  X: 817922-825475
Chromosome . Primary Identifier  X Chromosome Location . Start  817922
Chromosome Location . End  825475 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25E2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25E2.5a F25E2.5a 2679   X: 818320-818425

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5a.1 817922 825475 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222769   504   X: 817922-818425 Caenorhabditis elegans
Exon222778   137   X: 819004-819140 Caenorhabditis elegans
Exon222787   307   X: 819189-819495 Caenorhabditis elegans
Exon222796   172   X: 819699-819870 Caenorhabditis elegans
Exon222805   53   X: 820203-820255 Caenorhabditis elegans
Exon222815   122   X: 820300-820421 Caenorhabditis elegans
Exon222823   131   X: 820601-820731 Caenorhabditis elegans
Exon222831   661   X: 822022-822682 Caenorhabditis elegans
Exon222843   126   X: 822853-822978 Caenorhabditis elegans
Exon222847   240   X: 823173-823412 Caenorhabditis elegans
Exon222855   152   X: 823459-823610 Caenorhabditis elegans
Exon222865   156   X: 823658-823813 Caenorhabditis elegans
Exon222871   102   X: 824068-824169 Caenorhabditis elegans
Exon222873   189   X: 825074-825262 Caenorhabditis elegans
Exon222881   74   X: 825402-825475 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25E2.5a.1 817922 825475 -1

1 Sequence

Length
3126

1 Sequence Ontology Term

Identifier Name Description
transcript