WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56F10.4.1 Sequence Name  F56F10.4.1
Length (nt)  3897   Chromosome Location  X: 864097-871089
Chromosome . Primary Identifier  X Chromosome Location . Start  864097
Chromosome Location . End  871089 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56F10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018987 lgl-1 F56F10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56F10.4 F56F10.4 2826   X: 865077-865214

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56F10.4.1 864097 871089 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon222899   1118   X: 864097-865214 Caenorhabditis elegans
Exon222903   107   X: 865606-865712 Caenorhabditis elegans
Exon222904   154   X: 865765-865918 Caenorhabditis elegans
Exon222905   233   X: 866123-866355 Caenorhabditis elegans
Exon222906   258   X: 866507-866764 Caenorhabditis elegans
Exon222907   493   X: 866944-867436 Caenorhabditis elegans
Exon222908   231   X: 867485-867715 Caenorhabditis elegans
Exon222909   185   X: 868593-868777 Caenorhabditis elegans
Exon222910   155   X: 868829-868983 Caenorhabditis elegans
Exon222911   197   X: 869129-869325 Caenorhabditis elegans
Exon222912   239   X: 869372-869610 Caenorhabditis elegans
Exon222913   111   X: 869958-870068 Caenorhabditis elegans
Exon222914   238   X: 870423-870660 Caenorhabditis elegans
Exon222915   178   X: 870912-871089 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56F10.4.1 864097 871089 -1

1 Sequence

Length
3897

1 Sequence Ontology Term

Identifier Name Description
transcript