WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56F10.4 Sequence Name  F56F10.4
Length (nt)  2826   Chromosome Location  X: 865077-865214
Chromosome . Primary Identifier  X Chromosome Location . Start  865077
Chromosome Location . End  865214
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56F10.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45655 LGL-1 106.8 941 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00002400
WBRNAi00048736
WBRNAi00099817
WBRNAi00099810
WBRNAi00015839
WBRNAi00099204
WBRNAi00099211
WBRNAi00099608
WBRNAi00099615
WBRNAi00099406
WBRNAi00099413

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56F10.4 865077 865214 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018987 lgl-1 F56F10.4 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56F10.4 865077 865214 -1
CDS:F56F10.4 865606 865712 -1
CDS:F56F10.4 865765 865918 -1
CDS:F56F10.4 866123 866355 -1
CDS:F56F10.4 866507 866764 -1
CDS:F56F10.4 866944 867436 -1
CDS:F56F10.4 867485 867715 -1
CDS:F56F10.4 868593 868777 -1
CDS:F56F10.4 868829 868983 -1
CDS:F56F10.4 869129 869325 -1
CDS:F56F10.4 869372 869610 -1
CDS:F56F10.4 869958 870068 -1
CDS:F56F10.4 870423 870660 -1
CDS:F56F10.4 870912 870998 -1

1 Sequence

Length
2826

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56F10.4.1 F56F10.4.1 3897   X: 864097-871089