WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53H8.4 Sequence Name  F53H8.4
Length (nt)  1008   Chromosome Location  X: 945268-945400
Chromosome . Primary Identifier  X Chromosome Location . Start  945268
Chromosome Location . End  945400
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H8.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04657 SMS-2 38.7 335 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00048202
WBRNAi00032726

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53H8.4 945268 945400 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004893 sms-2 F53H8.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53H8.4 945268 945400 -1
CDS:F53H8.4 945801 945977 -1
CDS:F53H8.4 946045 946194 -1
CDS:F53H8.4 946672 946878 -1
CDS:F53H8.4 947509 947732 -1
CDS:F53H8.4 948767 948883 -1

1 Sequence

Length
1008

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53H8.4.1 F53H8.4.1 1450   X: 944826-948883