WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H8.1.1 Sequence Name  F53H8.1.1
Length (nt)  1413   Chromosome Location  X: 954975-957762
Chromosome . Primary Identifier  X Chromosome Location . Start  954975
Chromosome Location . End  957762 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000164 apm-3 F53H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H8.1 F53H8.1 1245   X: 954997-955031

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H8.1.1 954975 957762 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223209   57   X: 954975-955031 Caenorhabditis elegans
Exon223210   79   X: 955091-955169 Caenorhabditis elegans
Exon223211   106   X: 955228-955333 Caenorhabditis elegans
Exon223212   113   X: 955400-955512 Caenorhabditis elegans
Exon223213   282   X: 955560-955841 Caenorhabditis elegans
Exon223214   114   X: 956280-956393 Caenorhabditis elegans
Exon223215   74   X: 956438-956511 Caenorhabditis elegans
Exon223216   103   X: 956563-956665 Caenorhabditis elegans
Exon223217   246   X: 956718-956963 Caenorhabditis elegans
Exon223218   239   X: 957524-957762 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H8.1.1 954975 957762 1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
transcript