WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A4.10.1 Sequence Name  F55A4.10.1
Length (nt)  2013   Chromosome Location  X: 1004337-1009422
Chromosome . Primary Identifier  X Chromosome Location . Start  1004337
Chromosome Location . End  1009422 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A4.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018861 cutl-21 F55A4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A4.10 F55A4.10 1902   X: 1004346-1004427

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55A4.10.1 1004337 1009422 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223348   91   X: 1004337-1004427 Caenorhabditis elegans
Exon223349   105   X: 1005755-1005859 Caenorhabditis elegans
Exon223350   89   X: 1005908-1005996 Caenorhabditis elegans
Exon223351   158   X: 1006042-1006199 Caenorhabditis elegans
Exon223352   109   X: 1006241-1006349 Caenorhabditis elegans
Exon223353   55   X: 1006856-1006910 Caenorhabditis elegans
Exon223354   246   X: 1006963-1007208 Caenorhabditis elegans
Exon223355   220   X: 1007256-1007475 Caenorhabditis elegans
Exon223356   84   X: 1007771-1007854 Caenorhabditis elegans
Exon223357   52   X: 1007901-1007952 Caenorhabditis elegans
Exon223358   98   X: 1008011-1008108 Caenorhabditis elegans
Exon223359   136   X: 1008160-1008295 Caenorhabditis elegans
Exon223360   124   X: 1008476-1008599 Caenorhabditis elegans
Exon223361   105   X: 1008877-1008981 Caenorhabditis elegans
Exon223362   164   X: 1009031-1009194 Caenorhabditis elegans
Exon223363   177   X: 1009246-1009422 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55A4.10.1 1004337 1009422 1

1 Sequence

Length
2013

1 Sequence Ontology Term

Identifier Name Description
transcript