WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D9.4.1 Sequence Name  C05D9.4.1
Length (nt)  611   Chromosome Location  X: 1108058-1110160
Chromosome . Primary Identifier  X Chromosome Location . Start  1108058
Chromosome Location . End  1110160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015473 C05D9.4 C05D9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D9.4 C05D9.4 552   X: 1108067-1108121

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D9.4.1 1108058 1110160 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223588   64   X: 1108058-1108121 Caenorhabditis elegans
Exon223589   112   X: 1108165-1108276 Caenorhabditis elegans
Exon223590   67   X: 1108557-1108623 Caenorhabditis elegans
Exon223591   168   X: 1108802-1108969 Caenorhabditis elegans
Exon223592   200   X: 1109961-1110160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D9.4.1 1108058 1110160 1

1 Sequence

Length
611

1 Sequence Ontology Term

Identifier Name Description
transcript