WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56C3.4.1 Sequence Name  F56C3.4.1
Length (nt)  1035   Chromosome Location  X: 1359594-1360731
Chromosome . Primary Identifier  X Chromosome Location . Start  1359594
Chromosome Location . End  1360731 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018941 F56C3.4 F56C3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56C3.4 F56C3.4 870   X: 1359720-1360505

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56C3.4.1 1359594 1360731 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon223999   912   X: 1359594-1360505 Caenorhabditis elegans
Exon224000   66   X: 1360559-1360624 Caenorhabditis elegans
Exon224001   57   X: 1360675-1360731 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56C3.4.1 1359594 1360731 -1

1 Sequence

Length
1035

1 Sequence Ontology Term

Identifier Name Description
transcript