WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E20.1.1 Sequence Name  H39E20.1.1
Length (nt)  1081   Chromosome Location  X: 1396275-1397616
Chromosome . Primary Identifier  X Chromosome Location . Start  1396275
Chromosome Location . End  1397616 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E20.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019267 H39E20.1 H39E20.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E20.1 H39E20.1 150   X: 1396353-1396429

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H39E20.1.1 1396275 1397616 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224035   155   X: 1396275-1396429 Caenorhabditis elegans
Exon224036   107   X: 1396479-1396585 Caenorhabditis elegans
Exon224037   819   X: 1396798-1397616 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H39E20.1.1 1396275 1397616 -1

1 Sequence

Length
1081

1 Sequence Ontology Term

Identifier Name Description
transcript