WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00255581 Gene Name  mir-4810.2
Sequence Name  ? Y59E1B.15 Organism  Caenorhabditis elegans
Biotype  SO:0001265 Genetic Position 
Length (nt)  ? 60
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00255581

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y59E1B.15a Y59E1B.15a 22   X: 1874016-1874037
Transcript:Y59E1B.15b Y59E1B.15b 22   X: 1874054-1874075
 

Other

0 CDSs

1 RNAi Result

WormBase ID
WBRNAi00057767

10 Allele

Public Name
gk963725
gk963864
gk964444
gk964445
gk963977
WBVar01600839
WBVar01824749
gk880640
gk591249
gk961090

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00255581 1874016 1874075 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  microRNAs that showed significantly increased expression in male gonad comparing to in hermaphrodite gonad. DESeq2. miRNAs were considered significantly expressed between male and hermaphrodite if they had log2(fold change) > 1 and P-adj < 0.01. WBPaper00067242:male_vs_hermaphrodite-gonad_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00255581 1874016 1874075 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
60

1 Sequence Ontology Term