WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53B1.8a Sequence Name  F53B1.8a
Length (nt)  2406   Chromosome Location  X: 2124111-2124191
Chromosome . Primary Identifier  X Chromosome Location . Start  2124111
Chromosome Location . End  2124191
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B1.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49620 F53B1.8, isoform a 88.6 801 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00048074
WBRNAi00015473
WBRNAi00032667

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53B1.8a 2124111 2124191 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018739 F53B1.8 F53B1.8 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53B1.8a 2124111 2124191 -1
CDS:F53B1.8a 2125013 2125168 -1
CDS:F53B1.8a 2125217 2125537 -1
CDS:F53B1.8a 2125878 2126067 -1
CDS:F53B1.8a 2126120 2126564 -1
CDS:F53B1.8a 2127033 2127283 -1
CDS:F53B1.8a 2127334 2127655 -1
CDS:F53B1.8a 2127817 2128108 -1
CDS:F53B1.8a 2128535 2128684 -1
CDS:F53B1.8a 2129770 2129851 -1
CDS:F53B1.8a 2130074 2130189 -1

1 Sequence

Length
2406

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53B1.8a.1 F53B1.8a.1 3156   X: 2123413-2130241