WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F48B9.5 Sequence Name  F48B9.5
Length (nt)  702   Chromosome Location  X: 2147614-2147671
Chromosome . Primary Identifier  X Chromosome Location . Start  2147614
Chromosome Location . End  2147671
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48B9.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35546 NPAX-2 26.3 233 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047720
WBRNAi00015234
WBRNAi00032471

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F48B9.5 2147614 2147671 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018591 npax-2 F48B9.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F48B9.5 2147614 2147671 -1
CDS:F48B9.5 2147718 2147819 -1
CDS:F48B9.5 2147866 2147952 -1
CDS:F48B9.5 2147999 2148072 -1
CDS:F48B9.5 2148123 2148205 -1
CDS:F48B9.5 2148824 2148956 -1
CDS:F48B9.5 2149004 2149099 -1
CDS:F48B9.5 2149184 2149252 -1

1 Sequence

Length
702

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F48B9.5.1 F48B9.5.1 1891   X: 2147279-2150106