WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24D8.1c.1 Sequence Name  T24D8.1c.1
Length (nt)  1509   Chromosome Location  X: 2360126-2364655
Chromosome . Primary Identifier  X Chromosome Location . Start  2360126
Chromosome Location . End  2364655 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24D8.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020767 lgc-40 T24D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24D8.1c T24D8.1c 1509   X: 2360126-2360288

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T24D8.1c.1 2360126 2364655 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225521   163   X: 2360126-2360288 Caenorhabditis elegans
Exon225525   24   X: 2360430-2360453 Caenorhabditis elegans
Exon225528   54   X: 2360673-2360726 Caenorhabditis elegans
Exon225532   170   X: 2361135-2361304 Caenorhabditis elegans
Exon225536   75   X: 2361470-2361544 Caenorhabditis elegans
Exon225540   433   X: 2361598-2362030 Caenorhabditis elegans
Exon225545   44   X: 2362089-2362132 Caenorhabditis elegans
Exon225550   168   X: 2362183-2362350 Caenorhabditis elegans
Exon225553   122   X: 2364057-2364178 Caenorhabditis elegans
Exon225557   91   X: 2364226-2364316 Caenorhabditis elegans
Exon225559   165   X: 2364491-2364655 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T24D8.1c.1 2360126 2364655 1

1 Sequence

Length
1509

1 Sequence Ontology Term

Identifier Name Description
transcript