WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43H6.9b.1 Sequence Name  C43H6.9b.1
Length (nt)  2658   Chromosome Location  X: 2414064-2419877
Chromosome . Primary Identifier  X Chromosome Location . Start  2414064
Chromosome Location . End  2419877 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43H6.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001618 glr-7 C43H6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43H6.9b C43H6.9b 2658   X: 2414064-2414274

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.9b.1 2414064 2419877 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225669   211   X: 2414064-2414274 Caenorhabditis elegans
Exon225672   204   X: 2414767-2414970 Caenorhabditis elegans
Exon225675   133   X: 2415023-2415155 Caenorhabditis elegans
Exon225678   191   X: 2415202-2415392 Caenorhabditis elegans
Exon225681   111   X: 2415440-2415550 Caenorhabditis elegans
Exon225685   139   X: 2415608-2415746 Caenorhabditis elegans
Exon225689   80   X: 2416493-2416572 Caenorhabditis elegans
Exon225692   449   X: 2416620-2417068 Caenorhabditis elegans
Exon225695   168   X: 2417117-2417284 Caenorhabditis elegans
Exon225698   210   X: 2417340-2417549 Caenorhabditis elegans
Exon225701   162   X: 2417601-2417762 Caenorhabditis elegans
Exon225704   51   X: 2417842-2417892 Caenorhabditis elegans
Exon225706   176   X: 2418577-2418752 Caenorhabditis elegans
Exon225709   141   X: 2418795-2418935 Caenorhabditis elegans
Exon225710   150   X: 2418980-2419129 Caenorhabditis elegans
Exon225711   82   X: 2419796-2419877 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.9b.1 2414064 2419877 -1

1 Sequence

Length
2658

1 Sequence Ontology Term

Identifier Name Description
transcript