WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02E10.4a.1 Sequence Name  K02E10.4a.1
Length (nt)  1727   Chromosome Location  X: 2483263-2488482
Chromosome . Primary Identifier  X Chromosome Location . Start  2483263
Chromosome Location . End  2488482 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E10.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019318 K02E10.4 K02E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02E10.4a K02E10.4a 1461   X: 2483263-2483530

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.4a.1 2483263 2488482 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225878   268   X: 2483263-2483530 Caenorhabditis elegans
Exon225879   75   X: 2483586-2483660 Caenorhabditis elegans
Exon225881   188   X: 2483709-2483896 Caenorhabditis elegans
Exon225883   231   X: 2484687-2484917 Caenorhabditis elegans
Exon225885   296   X: 2484967-2485262 Caenorhabditis elegans
Exon225887   151   X: 2485315-2485465 Caenorhabditis elegans
Exon225889   105   X: 2487864-2487968 Caenorhabditis elegans
Exon225891   82   X: 2488027-2488108 Caenorhabditis elegans
Exon225894   331   X: 2488152-2488482 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.4a.1 2483263 2488482 1

1 Sequence

Length
1727

1 Sequence Ontology Term

Identifier Name Description
transcript