WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02E10.2b.1 Sequence Name  K02E10.2b.1
Length (nt)  2130   Chromosome Location  X: 2489090-2493309
Chromosome . Primary Identifier  X Chromosome Location . Start  2489090
Chromosome Location . End  2493309 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E10.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001844 hid-1 K02E10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02E10.2b K02E10.2b 2130   X: 2489090-2489158

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.2b.1 2489090 2493309 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225896   69   X: 2489090-2489158 Caenorhabditis elegans
Exon225898   189   X: 2489371-2489559 Caenorhabditis elegans
Exon225900   186   X: 2489608-2489793 Caenorhabditis elegans
Exon225902   169   X: 2489841-2490009 Caenorhabditis elegans
Exon225904   179   X: 2490297-2490475 Caenorhabditis elegans
Exon225906   343   X: 2490531-2490873 Caenorhabditis elegans
Exon225908   152   X: 2490922-2491073 Caenorhabditis elegans
Exon225910   79   X: 2491739-2491817 Caenorhabditis elegans
Exon225912   165   X: 2491891-2492055 Caenorhabditis elegans
Exon225914   117   X: 2492109-2492225 Caenorhabditis elegans
Exon225916   105   X: 2492278-2492382 Caenorhabditis elegans
Exon225918   96   X: 2492433-2492528 Caenorhabditis elegans
Exon225920   118   X: 2492839-2492956 Caenorhabditis elegans
Exon225922   163   X: 2493147-2493309 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.2b.1 2489090 2493309 1

1 Sequence

Length
2130

1 Sequence Ontology Term

Identifier Name Description
transcript