WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02E10.8a.1 Sequence Name  K02E10.8a.1
Length (nt)  2544   Chromosome Location  X: 2509317-2515317
Chromosome . Primary Identifier  X Chromosome Location . Start  2509317
Chromosome Location . End  2515317 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E10.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006365 syg-1 K02E10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02E10.8a K02E10.8a 2112   X: 2509741-2509861

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.8a.1 2509317 2515317 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225909   545   X: 2509317-2509861 Caenorhabditis elegans
Exon225913   128   X: 2509977-2510104 Caenorhabditis elegans
Exon225914   104   X: 2510279-2510382 Caenorhabditis elegans
Exon225917   129   X: 2510434-2510562 Caenorhabditis elegans
Exon225922   160   X: 2511058-2511217 Caenorhabditis elegans
Exon225925   152   X: 2511263-2511414 Caenorhabditis elegans
Exon225928   107   X: 2511463-2511569 Caenorhabditis elegans
Exon225931   148   X: 2511627-2511774 Caenorhabditis elegans
Exon225934   109   X: 2511890-2511998 Caenorhabditis elegans
Exon225937   186   X: 2512123-2512308 Caenorhabditis elegans
Exon225940   73   X: 2512362-2512434 Caenorhabditis elegans
Exon225943   121   X: 2513296-2513416 Caenorhabditis elegans
Exon225946   198   X: 2513464-2513661 Caenorhabditis elegans
Exon225951   106   X: 2514162-2514267 Caenorhabditis elegans
Exon225954   123   X: 2514839-2514961 Caenorhabditis elegans
Exon225957   155   X: 2515163-2515317 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.8a.1 2509317 2515317 -1

1 Sequence

Length
2544

1 Sequence Ontology Term

Identifier Name Description
transcript