WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K02E10.8a Sequence Name  K02E10.8a
Length (nt)  2112   Chromosome Location  X: 2509741-2509861
Chromosome . Primary Identifier  X Chromosome Location . Start  2509741
Chromosome Location . End  2509861
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E10.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37121 SYG-1, isoform a 78.0 703 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00049710
WBRNAi00016458

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K02E10.8a 2509741 2509861 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006365 syg-1 K02E10.8 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:K02E10.8a 2509741 2509861 -1
CDS:K02E10.8a 2509977 2510104 -1
CDS:K02E10.8a 2510279 2510382 -1
CDS:K02E10.8a 2510434 2510562 -1
CDS:K02E10.8a 2511058 2511217 -1
CDS:K02E10.8a 2511263 2511414 -1
CDS:K02E10.8a 2511463 2511569 -1
CDS:K02E10.8a 2511627 2511774 -1
CDS:K02E10.8a 2511890 2511998 -1
CDS:K02E10.8a 2512123 2512308 -1
CDS:K02E10.8a 2512362 2512434 -1
CDS:K02E10.8a 2513296 2513416 -1
CDS:K02E10.8a 2513464 2513661 -1
CDS:K02E10.8a 2514162 2514267 -1
CDS:K02E10.8a 2514839 2514961 -1
CDS:K02E10.8a 2515163 2515309 -1

1 Sequence

Length
2112

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K02E10.8a.1 K02E10.8a.1 2544   X: 2509317-2515317