WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03G6.2b.1 Sequence Name  T03G6.2b.1
Length (nt)  1857   Chromosome Location  X: 2594003-2606732
Chromosome . Primary Identifier  X Chromosome Location . Start  2594003
Chromosome Location . End  2606732 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03G6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003630 nhr-40 T03G6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03G6.2b T03G6.2b 1305   X: 2594097-2594109

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03G6.2b.1 2594003 2606732 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226154   107   X: 2594003-2594109 Caenorhabditis elegans
Exon226157   119   X: 2600806-2600924 Caenorhabditis elegans
Exon226159   52   X: 2601750-2601801 Caenorhabditis elegans
Exon226161   66   X: 2601848-2601913 Caenorhabditis elegans
Exon226163   215   X: 2602550-2602764 Caenorhabditis elegans
Exon226165   116   X: 2602814-2602929 Caenorhabditis elegans
Exon226167   178   X: 2603306-2603483 Caenorhabditis elegans
Exon226169   91   X: 2604381-2604471 Caenorhabditis elegans
Exon226171   97   X: 2604525-2604621 Caenorhabditis elegans
Exon226173   110   X: 2604709-2604818 Caenorhabditis elegans
Exon226175   152   X: 2604981-2605132 Caenorhabditis elegans
Exon226177   554   X: 2606179-2606732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03G6.2b.1 2594003 2606732 1

1 Sequence

Length
1857

1 Sequence Ontology Term

Identifier Name Description
transcript