WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54G2.1g Sequence Name  F54G2.1g
Length (nt)  3432   Chromosome Location  X: 2621745-2621830
Chromosome . Primary Identifier  X Chromosome Location . Start  2621745
Chromosome Location . End  2621830
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54G2.1g

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53175 F54G2.1, isoform g 131.1 1143 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00001763
WBRNAi00048385
WBRNAi00032820
WBRNAi00015665

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54G2.1g 2621745 2621830 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018837 F54G2.1 F54G2.1 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54G2.1g 2621745 2621830 -1
CDS:F54G2.1g 2621881 2621956 -1
CDS:F54G2.1g 2622476 2622587 -1
CDS:F54G2.1g 2622634 2622796 -1
CDS:F54G2.1g 2622844 2622925 -1
CDS:F54G2.1g 2623625 2623708 -1
CDS:F54G2.1g 2624173 2624412 -1
CDS:F54G2.1g 2624460 2624654 -1
CDS:F54G2.1g 2624696 2624809 -1
CDS:F54G2.1g 2624860 2625045 -1
CDS:F54G2.1g 2625091 2625159 -1
CDS:F54G2.1g 2625207 2625327 -1
CDS:F54G2.1g 2625382 2626071 -1
CDS:F54G2.1g 2626513 2626992 -1
CDS:F54G2.1g 2627043 2627257 -1
CDS:F54G2.1g 2627428 2627546 -1
CDS:F54G2.1g 2627602 2627668 -1
CDS:F54G2.1g 2627945 2628100 -1
CDS:F54G2.1g 2629547 2629673 -1
CDS:F54G2.1g 2630659 2630708 -1

1 Sequence

Length
3432

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54G2.1g.1 F54G2.1g.1 4085   X: 2621274-2630890